Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein deglycase hcha | E9D03_RS20095 | Not Available | Negative | 4312333 - 4313184 | 31183.1 |
| phosphohydrolase | E9D03_RS20110 | Not Available | Positive | 4315933 - 4316628 | 25836.7 |
| dna cytosine methyltransferase | E9D03_RS20115 | Not Available | Positive | 4316695 - 4318113 | 53467.8 |
| very short patch repair endonuclease | E9D03_RS20120 | Not Available | Positive | 4318094 - 4318564 | 18043.7 |
| drug/metabolite exporter yeda | E9D03_RS20125 | Not Available | Negative | 4318553 - 4319473 | 32196.0 |
| duf808 domain-containing protein | E9D03_RS20130 | Not Available | Positive | 4319646 - 4320563 | 32162.8 |
| duf2158 domain-containing protein | E9D03_RS20135 | Not Available | Positive | 4320642 - 4320824 | 6678.85 |
| cellulose biosynthesis regulator yedq | E9D03_RS20140 | Not Available | Positive | 4320995 - 4322689 | 64290.5 |
| mannosyl-3-phosphoglycerate phosphatase-related protein | E9D03_RS20145 | Not Available | Negative | 4322686 - 4323501 | 30472.1 |
| peroxide/acid resistance protein yodd | E9D03_RS20150 | Not Available | Negative | 4323799 - 4324026 | 8579.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




