Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-trp | Not Available | Not Available | Positive | 4303769 - 4303844 | Not Available |
| site-specific dna recombinase | E9D03_RS20050 | Not Available | Positive | 4303925 - 4304479 | 20512.1 |
| hypothetical protein | E9D03_RS20055 | Not Available | Negative | 4304537 - 4305310 | 29051.6 |
| cytochrome b | E9D03_RS20060 | Not Available | Negative | 4306122 - 4306652 | 20366.4 |
| metal-binding protein zint | E9D03_RS20065 | Not Available | Negative | 4306995 - 4307645 | 24693.1 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | E9D03_RS20070 | Not Available | Negative | 4307902 - 4308537 | 24057.6 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | E9D03_RS20075 | Not Available | Negative | 4308538 - 4309542 | 37358.9 |
| hydroxyisourate hydrolase | E9D03_RS20080 | Not Available | Negative | 4309650 - 4310063 | 15537.6 |
| response regulator transcription factor hprr | E9D03_RS20085 | Not Available | Positive | 4310196 - 4310867 | 25010.2 |
| heavy metal sensor histidine kinase | E9D03_RS20090 | Not Available | Positive | 4310867 - 4312225 | 50864.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




