Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-2-hydroxyglutarate oxidase | E9D03_RS19635 | Not Available | Negative | 4223215 - 4224483 | 46044.6 |
| carbon starvation induced protein csid | E9D03_RS19640 | Not Available | Negative | 4224503 - 4225480 | 37508.8 |
| alpha amylase | E9D03_RS19645 | Not Available | Negative | 4225817 - 4226824 | 38073.5 |
| alpha-amylase | E9D03_RS19650 | Not Available | Negative | 4226831 - 4228069 | 46742.3 |
| Trna-met | Not Available | Not Available | Positive | 4228630 - 4228705 | Not Available |
| recombinase family protein | E9D03_RS19665 | Not Available | Positive | 4231186 - 4231353 | 6242.96 |
| hypothetical protein | E9D03_RS19670 | Not Available | Positive | 4231370 - 4231487 | 4001.67 |
| flxa-like family protein | E9D03_RS19675 | Not Available | Positive | 4231570 - 4231911 | 12496.8 |
| lysr family transcriptional regulator | E9D03_RS19680 | Not Available | Negative | 4231902 - 4232828 | 33935.1 |
| bile acid:sodium symporter | E9D03_RS19685 | Not Available | Positive | 4232918 - 4233916 | 36377.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




