Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate--cysteine ligase | E9D03_RS19485 | Not Available | Positive | 4196055 - 4197611 | 58258.5 |
| s-ribosylhomocysteine lyase | E9D03_RS19490 | Not Available | Positive | 4197761 - 4198276 | 19445.4 |
| multidrug efflux mfs transporter permease subunit emrb | E9D03_RS19495 | Not Available | Negative | 4198340 - 4199878 | 55627.7 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emra | E9D03_RS19500 | Not Available | Negative | 4199895 - 4201067 | 42739.5 |
| multidrug efflux transporter emrab transcriptional repressor emrr | E9D03_RS19505 | Not Available | Negative | 4201194 - 4201724 | 20564.7 |
| hypothetical protein | E9D03_RS19510 | Not Available | Positive | 4201695 - 4201796 | 3678.61 |
| l-valine transporter subunit ygah | E9D03_RS19515 | Not Available | Negative | 4201815 - 4202150 | 11996.2 |
| azlc family abc transporter permease | E9D03_RS19520 | Not Available | Negative | 4202140 - 4202877 | 26095.1 |
| mfs transporter | E9D03_RS19525 | Not Available | Negative | 4203001 - 4204185 | 41656.9 |
| proline/glycine betaine abc transporter substrate-binding protein prox | E9D03_RS19530 | Not Available | Negative | 4204377 - 4205369 | 36024.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




