Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system effector espk | E9D03_RS19290 | Not Available | Negative | 4166532 - 4167893 | 51008.8 |
| spermidine/putrescine abc transporter permease potb | E9D03_RS19295 | Not Available | Negative | 4168257 - 4169120 | 32353.4 |
| spermidine/putrescine abc transporter atp-binding protein pota | E9D03_RS19300 | Not Available | Negative | 4169104 - 4170240 | 43030.8 |
| peptidase t | E9D03_RS19305 | Not Available | Positive | 4170490 - 4171716 | 44912.0 |
| cupin domain-containing protein | E9D03_RS19310 | Not Available | Negative | 4171765 - 4172886 | 42597.2 |
| excisionase | E9D03_RS19460 | Not Available | Negative | 4193475 - 4193711 | 8873.95 |
| replication protein | E9D03_RS19465 | Not Available | Positive | 4193815 - 4194639 | 30841.9 |
| replication protein repp | E9D03_RS19470 | Not Available | Positive | 4194636 - 4194720 | 3415.11 |
| fructose-1-phosphate/6-phosphogluconate phosphatase | E9D03_RS19475 | Not Available | Positive | 4194991 - 4195557 | 20800.1 |
| deda family protein | E9D03_RS19480 | Not Available | Positive | 4195554 - 4195982 | 15546.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




