Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| respiratory nitrate reductase subunit gamma | E9D03_RS19220 | Not Available | Positive | 4153675 - 4154355 | 26019.5 |
| phzf family isomerase | E9D03_RS19225 | Not Available | Positive | 4154434 - 4155327 | 32240.7 |
| flavin reductase family protein | E9D03_RS19235 | Not Available | Positive | 4156566 - 4157009 | 16216.3 |
| tautomerase ppta | E9D03_RS19240 | Not Available | Negative | 4157013 - 4157240 | 8488.22 |
| tail assembly protein | E9D03_RS19245 | Not Available | Positive | 4157326 - 4157425 | 3617.38 |
| hypothetical protein | E9D03_RS19250 | Not Available | Positive | 4157438 - 4157527 | 3267.02 |
| type iii secretion system effector e3 ubiquitin ligase nlel | E9D03_RS19255 | Not Available | Positive | 4157547 - 4159895 | 87551.5 |
| type iii secretion system effector espn | E9D03_RS19260 | Not Available | Positive | 4160486 - 4163887 | 129942.0 |
| nleb | E9D03_RS19280 | Not Available | Positive | 4165991 - 4166116 | 5129.03 |
| secretion protein espo | E9D03_RS19285 | Not Available | Negative | 4166196 - 4166471 | 10257.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




