Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase-n subunit alpha | E9D03_RS19170 | Not Available | Negative | 4137658 - 4140705 | 112779.0 |
| aromatic amino acid efflux dmt transporter yddg | E9D03_RS19175 | Not Available | Positive | 4140937 - 4141818 | 31546.3 |
| porin ompc | E9D03_RS19180 | Not Available | Positive | 4142077 - 4143177 | 41027.4 |
| leucine-rich repeat domain-containing protein | E9D03_RS19185 | Not Available | Positive | 4143340 - 4143849 | 19112.5 |
| leucine rich repeat family protein | E9D03_RS19190 | Not Available | Positive | 4143936 - 4144604 | 25238.4 |
| t3ss effector leucine-rich repeat protein espr1 | E9D03_RS19195 | Not Available | Positive | 4144667 - 4145926 | 48439.4 |
| nark family nitrate/nitrite mfs transporter | E9D03_RS19200 | Not Available | Positive | 4146232 - 4147620 | 49971.2 |
| nitrate reductase subunit alpha | E9D03_RS19205 | Not Available | Positive | 4147702 - 4151442 | 140045.0 |
| nitrate reductase subunit beta | E9D03_RS19210 | Not Available | Positive | 4151439 - 4152983 | 58548.1 |
| nitrate reductase molybdenum cofactor assembly chaperone | E9D03_RS19215 | Not Available | Positive | 4152983 - 4153678 | 26213.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




