Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | E9D03_RS19120 | Not Available | Positive | 4129268 - 4130254 | 36102.0 |
| atp-binding cassette domain-containing protein | E9D03_RS19125 | Not Available | Positive | 4130247 - 4131173 | 34553.0 |
| peroxiredoxin osmc | E9D03_RS19130 | Not Available | Negative | 4131229 - 4131660 | 15119.0 |
| biofilm-dependent modulation protein | E9D03_RS19135 | Not Available | Positive | 4132005 - 4132220 | 7988.24 |
| stationary-phase-induced ribosome-associated protein | E9D03_RS19140 | Not Available | Positive | 4132322 - 4132459 | 5096.13 |
| nad-dependent malic enzyme | E9D03_RS19145 | Not Available | Positive | 4132616 - 4134313 | 63136.9 |
| alcohol dehydrogenase adhp | E9D03_RS19150 | Not Available | Positive | 4134447 - 4135457 | 35371.6 |
| higa family addiction module antidote protein | E9D03_RS19155 | Not Available | Positive | 4135603 - 4135887 | 10313.6 |
| formate dehydrogenase-n subunit gamma | E9D03_RS19160 | Not Available | Negative | 4136115 - 4136768 | 25370.0 |
| formate dehydrogenase subunit beta | E9D03_RS19165 | Not Available | Negative | 4136761 - 4137645 | 32213.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




