Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor cytidylyltransferase | E9D03_RS18955 | Not Available | Negative | 4089985 - 4090563 | 21468.3 |
| putative selenium-dependent hydroxylase accessory protein yqec | E9D03_RS18960 | Not Available | Positive | 4090666 - 4091436 | 28164.2 |
| ef2563 family selenium-dependent molybdenum hydroxylase system protein | E9D03_RS18965 | Not Available | Positive | 4091484 - 4093109 | 57685.5 |
| carbamate kinase | E9D03_RS18970 | Not Available | Negative | 4093150 - 4094082 | 33115.0 |
| dihydropyrimidinase | E9D03_RS18975 | Not Available | Negative | 4094130 - 4095515 | 51015.1 |
| ygey family selenium metabolism-linked hydrolase | E9D03_RS18980 | Not Available | Negative | 4095568 - 4096779 | 44806.4 |
| diaminopropionate ammonia-lyase | E9D03_RS18985 | Not Available | Negative | 4096837 - 4098033 | 43330.1 |
| knotted carbamoyltransferase ygew | E9D03_RS18990 | Not Available | Negative | 4098091 - 4099278 | 43988.6 |
| sigma-54-dependent transcriptional regulator | E9D03_RS18995 | Not Available | Positive | 4099757 - 4101535 | 66094.0 |
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | E9D03_RS19000 | Not Available | Negative | 4101575 - 4102054 | 16950.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




