Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyl-gamma-glutamyl-phosphate reductase | E9D03_RS18850 | Not Available | Positive | 4061077 - 4062081 | 35862.1 |
| acetylglutamate kinase | E9D03_RS18855 | Not Available | Positive | 4062089 - 4062865 | 27161.3 |
| argininosuccinate lyase | E9D03_RS18860 | Not Available | Positive | 4062926 - 4064299 | 50288.1 |
| dna-binding transcriptional regulator oxyr | E9D03_RS18865 | Not Available | Positive | 4064566 - 4065483 | 34278.0 |
| si-specific nad(p)(+) transhydrogenase | E9D03_RS18870 | Not Available | Negative | 4065466 - 4066866 | 51563.4 |
| amidohydrolase | E9D03_RS18875 | Not Available | Positive | 4067196 - 4068362 | 42191.6 |
| mfs transporter | E9D03_RS18880 | Not Available | Positive | 4068405 - 4069721 | 46995.3 |
| hth-type transcriptional repressor fabr | E9D03_RS18885 | Not Available | Positive | 4069825 - 4070475 | 24536.5 |
| yijd family membrane protein | E9D03_RS18890 | Not Available | Positive | 4070475 - 4070834 | 13024.3 |
| trna (uridine(54)-c5)-methyltransferase trma | E9D03_RS18895 | Not Available | Negative | 4070874 - 4071974 | 41911.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




