Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| utp--glucose-1-phosphate uridylyltransferase galu | E9D03_RS18635 | Not Available | Negative | 4010703 - 4011611 | 32944.2 |
| two-component system response regulator rssb | E9D03_RS18640 | Not Available | Negative | 4011813 - 4012826 | 37304.5 |
| patatin-like phospholipase rssa | E9D03_RS18645 | Not Available | Negative | 4012918 - 4013823 | 33041.0 |
| ychj family protein | E9D03_RS18650 | Not Available | Positive | 4013936 - 4014394 | 16973.2 |
| formyltetrahydrofolate deformylase | E9D03_RS18655 | Not Available | Positive | 4014444 - 4015286 | 31938.6 |
| Trna-tyr | Not Available | Not Available | Positive | 4015446 - 4015530 | Not Available |
| respiratory nitrate reductase subunit gamma | E9D03_RS18675 | Not Available | Negative | 4016070 - 4016747 | 25484.9 |
| nitrate reductase molybdenum cofactor assembly chaperone | E9D03_RS18680 | Not Available | Negative | 4016747 - 4017457 | 26450.3 |
| nitrate reductase subunit beta | E9D03_RS18685 | Not Available | Negative | 4017454 - 4018992 | 58083.6 |
| nitrate reductase subunit alpha | E9D03_RS18690 | Not Available | Negative | 4018989 - 4022732 | 140466.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




