Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yciu family protein | E9D03_RS18585 | Not Available | Positive | 3998119 - 3998448 | 12687.7 |
| murein tripeptide/oligopeptide abc transporter atp binding protein oppf | E9D03_RS18590 | Not Available | Negative | 3998501 - 3999505 | 37183.8 |
| murein tripeptide/oligopeptide abc transporter atp binding protein oppd | E9D03_RS18595 | Not Available | Negative | 3999502 - 4000515 | 37167.7 |
| oligopeptide abc transporter permease oppc | E9D03_RS18600 | Not Available | Negative | 4000527 - 4001435 | 33023.9 |
| oligopeptide abc transporter permease oppb | E9D03_RS18605 | Not Available | Negative | 4001450 - 4002370 | 33445.3 |
| oligopeptide abc transporter substrate-binding protein oppa | E9D03_RS18610 | Not Available | Negative | 4002456 - 4004087 | 60979.1 |
| naat family transporter yche | E9D03_RS18615 | Not Available | Negative | 4004825 - 4005472 | 23488.7 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | E9D03_RS18620 | Not Available | Positive | 4005949 - 4008624 | 96132.5 |
| thymidine kinase | E9D03_RS18625 | Not Available | Negative | 4008925 - 4009542 | 23399.9 |
| dna-binding transcriptional regulator h-ns | E9D03_RS18630 | Not Available | Positive | 4010146 - 4010559 | 15540.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




