Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| reactive chlorine species resistance protein rclc | E9D03_RS18470 | Not Available | Positive | 3975672 - 3976265 | 21757.5 |
| aldo/keto reductase | E9D03_RS18475 | Not Available | Negative | 3976425 - 3977294 | 32705.2 |
| helix-turn-helix domain-containing protein | E9D03_RS18480 | Not Available | Positive | 3977543 - 3978400 | 33893.7 |
| intimin-like adhesin fdec | E9D03_RS18485 | Not Available | Negative | 3978521 - 3982774 | 149592.0 |
| hypothetical protein | E9D03_RS18495 | Not Available | Positive | 3984108 - 3984464 | 13188.8 |
| lysr family transcriptional regulator | E9D03_RS18500 | Not Available | Negative | 3984752 - 3985678 | 34341.6 |
| alpha/beta hydrolase | E9D03_RS18505 | Not Available | Positive | 3985835 - 3986755 | 33267.6 |
| nadh-dependent flavin oxidoreductase | E9D03_RS18510 | Not Available | Positive | 3986990 - 3988132 | 41827.1 |
| 3'-5' exoribonuclease | E9D03_RS18520 | Not Available | Positive | 3988903 - 3989143 | 9381.93 |
| excisionase | E9D03_RS18525 | Not Available | Positive | 3989208 - 3989456 | 9211.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




