Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamate kinase | E9D03_RS18240 | Not Available | Negative | 3921490 - 3922383 | 31733.2 |
| duf2877 domain-containing protein | E9D03_RS18245 | Not Available | Negative | 3922380 - 3923195 | 29598.8 |
| duf1116 domain-containing protein | E9D03_RS18250 | Not Available | Negative | 3923206 - 3924465 | 45011.6 |
| acyl-coa synthetase fdra | E9D03_RS18255 | Not Available | Negative | 3924475 - 3926142 | 58584.4 |
| ureidoglycolate dehydrogenase | E9D03_RS18260 | Not Available | Positive | 3926459 - 3927508 | 37893.2 |
| allantoate deiminase | E9D03_RS18265 | Not Available | Positive | 3927530 - 3928765 | 45622.5 |
| (s)-ureidoglycine aminohydrolase | E9D03_RS18270 | Not Available | Positive | 3928776 - 3929561 | 28734.0 |
| glycerate 3-kinase | E9D03_RS18275 | Not Available | Negative | 3929789 - 3930934 | 38849.1 |
| uracil/xanthine transporter | E9D03_RS18280 | Not Available | Negative | 3930956 - 3932257 | 47242.2 |
| putative allantoin permease | E9D03_RS18290 | Not Available | Negative | 3933712 - 3935103 | 50125.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




