Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbria chaperone fimc | E9D03_RS18190 | Not Available | Negative | 3913203 - 3913895 | 25487.2 |
| type 1 fimbrial protein subunit fima | E9D03_RS18195 | Not Available | Negative | 3914115 - 3914657 | 18475.5 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | E9D03_RS18200 | Not Available | Positive | 3915137 - 3916003 | 30957.5 |
| ribosome-associated protein ybcj | E9D03_RS18205 | Not Available | Positive | 3916005 - 3916217 | 7389.95 |
| metal-dependent hydrolase | E9D03_RS18210 | Not Available | Positive | 3916325 - 3916846 | 19457.4 |
| cysteine--trna ligase | E9D03_RS18215 | Not Available | Negative | 3916882 - 3918267 | 52215.0 |
| peptidylprolyl isomerase b | E9D03_RS18220 | Not Available | Positive | 3918441 - 3918935 | 18168.5 |
| udp-2,3-diacylglucosamine diphosphatase | E9D03_RS18225 | Not Available | Positive | 3918938 - 3919660 | 26953.8 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | E9D03_RS18230 | Not Available | Positive | 3919778 - 3920287 | 17781.3 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | E9D03_RS18235 | Not Available | Positive | 3920284 - 3921351 | 39574.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




