Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | E9D03_RS00925 | Not Available | Negative | 207923 - 208639 | 26871.3 |
| abc transporter permease subunit | E9D03_RS00930 | Not Available | Negative | 208636 - 209322 | 24689.9 |
| histidine abc transporter substrate-binding protein hisj | E9D03_RS00935 | Not Available | Negative | 209412 - 210194 | 28484.9 |
| lysine/arginine/ornithine abc transporter substrate-binding protein argt | E9D03_RS00940 | Not Available | Negative | 210415 - 211197 | 27963.0 |
| ubix family flavin prenyltransferase | E9D03_RS00945 | Not Available | Negative | 211463 - 212032 | 20696.3 |
| amidophosphoribosyltransferase | E9D03_RS00950 | Not Available | Negative | 212127 - 213644 | 56505.3 |
| colicin v production protein | E9D03_RS00955 | Not Available | Negative | 213681 - 214169 | 17976.1 |
| cell division protein dedd | E9D03_RS00960 | Not Available | Negative | 214701 - 215363 | 22967.8 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | E9D03_RS00965 | Not Available | Negative | 215353 - 216621 | 45400.1 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | E9D03_RS00970 | Not Available | Negative | 216691 - 217605 | 33323.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




