Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66 family insertion sequence hypothetical protein | E9D03_RS18020 | Not Available | Positive | 3881117 - 3881446 | 12292.8 |
| is66 family insertion sequence element accessory protein tnpb | E9D03_RS18025 | Not Available | Positive | 3881433 - 3881774 | 13530.2 |
| is66-like element is682 family transposase | E9D03_RS18035 | Not Available | Negative | 3882717 - 3884330 | 61352.2 |
| is66 family insertion sequence element accessory protein tnpb | E9D03_RS18040 | Not Available | Negative | 3884361 - 3884711 | 13200.2 |
| is66 family insertion sequence hypothetical protein | E9D03_RS18045 | Not Available | Negative | 3884708 - 3885133 | 15853.1 |
| hypothetical protein | E9D03_RS18055 | Not Available | Positive | 3887471 - 3888142 | 26332.3 |
| hok/gef family protein | E9D03_RS18060 | Not Available | Negative | 3889015 - 3889155 | 5271.78 |
| type b 50s ribosomal protein l31 | E9D03_RS18065 | Not Available | Negative | 3889457 - 3889720 | 9916.74 |
| urease accessory protein ureg | E9D03_RS18080 | Not Available | Negative | 3890932 - 3891549 | 22125.6 |
| urease accessory protein uref | E9D03_RS18085 | Not Available | Negative | 3891561 - 3892235 | 25156.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




