Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate acetyltransferase | E9D03_RS00875 | Not Available | Positive | 198153 - 200297 | 77162.5 |
| putative basic amino acid antiporter yfcc | E9D03_RS00880 | Not Available | Positive | 200487 - 202007 | 54800.0 |
| nudix hydrolase yfcd | E9D03_RS00885 | Not Available | Negative | 202040 - 202582 | 20376.9 |
| phosphodiesterase | E9D03_RS00890 | Not Available | Negative | 202640 - 203191 | 19992.1 |
| glutathione transferase | E9D03_RS00895 | Not Available | Negative | 203247 - 203891 | 24300.0 |
| gsh-dependent disulfide bond oxidoreductase | E9D03_RS00900 | Not Available | Positive | 204027 - 204674 | 24402.2 |
| dihydroneopterin triphosphate 2'-epimerase | E9D03_RS00905 | Not Available | Positive | 204731 - 205093 | 14082.8 |
| tigr01777 family protein | E9D03_RS00910 | Not Available | Positive | 205114 - 206007 | 32759.9 |
| rpn family recombination-promoting nuclease/putative transposase | E9D03_RS00915 | Not Available | Negative | 206055 - 206945 | 34206.4 |
| histidine abc transporter atp-binding protein hisp | E9D03_RS00920 | Not Available | Negative | 207142 - 207915 | 28626.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




