Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter outer membrane beta-barrel domain-containing protein | E9D03_RS17505 | Not Available | Negative | 3773184 - 3774584 | 50472.5 |
| autotransporter barrel domain-containing lipoprotein | E9D03_RS17510 | Not Available | Negative | 3774581 - 3778612 | 138572.0 |
| autoinducer-2 kinase | E9D03_RS17515 | Not Available | Negative | 3779143 - 3780735 | 57589.1 |
| transcriptional regulator lsrr | E9D03_RS17520 | Not Available | Negative | 3780814 - 3781767 | 33828.0 |
| autoinducer 2 abc transporter atp-binding protein lsra | E9D03_RS17525 | Not Available | Positive | 3782016 - 3783551 | 55689.6 |
| autoinducer 2 abc transporter permease lsrc | E9D03_RS17530 | Not Available | Positive | 3783545 - 3784573 | 36368.1 |
| autoinducer 2 abc transporter permease lsrd | E9D03_RS17535 | Not Available | Positive | 3784573 - 3785565 | 34458.6 |
| autoinducer 2 abc transporter substrate-binding protein lsrb | E9D03_RS17540 | Not Available | Positive | 3785577 - 3786599 | 36686.9 |
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | E9D03_RS17545 | Not Available | Positive | 3786626 - 3787501 | 31896.6 |
| (4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | E9D03_RS17550 | Not Available | Positive | 3787525 - 3787815 | 11255.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




