Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit b | E9D03_RS00825 | Not Available | Negative | 187357 - 188019 | 25057.3 |
| nadh-quinone oxidoreductase subunit nuoa | E9D03_RS00830 | Not Available | Negative | 188035 - 188478 | 16458.2 |
| transcriptional regulator lrha | E9D03_RS00835 | Not Available | Negative | 189109 - 190047 | 34563.7 |
| pyridoxal phosphate-dependent aminotransferase | E9D03_RS00840 | Not Available | Positive | 190967 - 192184 | 45466.9 |
| 5'-deoxynucleotidase | E9D03_RS00845 | Not Available | Positive | 192268 - 192867 | 22695.3 |
| slc13 family permease | E9D03_RS00850 | Not Available | Negative | 192926 - 194758 | 65876.0 |
| hexitol phosphatase hpxa | E9D03_RS00855 | Not Available | Negative | 194845 - 195495 | 23026.8 |
| yfbu family protein | E9D03_RS00860 | Not Available | Negative | 195506 - 196000 | 19537.4 |
| duf412 domain-containing protein | E9D03_RS00865 | Not Available | Negative | 196083 - 196538 | 17214.1 |
| acetate kinase | E9D03_RS00870 | Not Available | Positive | 196876 - 198078 | 43293.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




