Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase subunit tatc | E9D03_RS16875 | Not Available | Positive | 3640811 - 3641587 | 28877.9 |
| 3'-5' ssdna/rna exonuclease tatd | E9D03_RS16880 | Not Available | Positive | 3641629 - 3642411 | 29028.6 |
| transcription/translation regulatory transformer protein rfah | E9D03_RS16885 | Not Available | Negative | 3642408 - 3642896 | 18341.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | E9D03_RS16890 | Not Available | Positive | 3643063 - 3644556 | 55650.9 |
| nad(p)h-flavin reductase | E9D03_RS16895 | Not Available | Positive | 3644602 - 3645303 | 26243.5 |
| acetyl-coa c-acyltransferase fada | E9D03_RS16900 | Not Available | Negative | 3645495 - 3646658 | 40843.6 |
| fatty acid oxidation complex subunit alpha fadb | E9D03_RS16905 | Not Available | Negative | 3646668 - 3648857 | 79563.4 |
| xaa-pro dipeptidase | E9D03_RS16910 | Not Available | Positive | 3649047 - 3650378 | 50198.9 |
| impact family protein | E9D03_RS16915 | Not Available | Positive | 3650378 - 3650992 | 21690.0 |
| trk system potassium transporter trkh | E9D03_RS16920 | Not Available | Positive | 3651031 - 3652482 | 52962.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




