Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator metr | E9D03_RS16825 | Not Available | Negative | 3629939 - 3630892 | 35631.0 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | E9D03_RS16830 | Not Available | Positive | 3631128 - 3633389 | 84780.3 |
| dienelactone hydrolase family protein | E9D03_RS16835 | Not Available | Negative | 3633429 - 3634244 | 29397.8 |
| uridine phosphorylase | E9D03_RS16840 | Not Available | Positive | 3634506 - 3635267 | 27151.7 |
| dna recombination protein rmuc | E9D03_RS16845 | Not Available | Positive | 3635408 - 3636835 | 54767.6 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | E9D03_RS16850 | Not Available | Positive | 3636930 - 3637685 | 28074.8 |
| ubiquinone biosynthesis protein ubij | E9D03_RS16855 | Not Available | Positive | 3637699 - 3638304 | 22077.8 |
| ubiquinone biosynthesis regulatory protein kinase ubib | E9D03_RS16860 | Not Available | Positive | 3638301 - 3639941 | 63206.4 |
| sec-independent protein translocase subunit tata | E9D03_RS16865 | Not Available | Positive | 3640020 - 3640289 | 9664.5 |
| sec-independent protein translocase subunit tatb | E9D03_RS16870 | Not Available | Positive | 3640293 - 3640808 | 18421.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




