Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na/pi cotransporter family protein | E9D03_RS16625 | Not Available | Negative | 3582349 - 3583980 | 59449.6 |
| methionine synthase | E9D03_RS16630 | Not Available | Negative | 3584200 - 3587883 | 136048.0 |
| glyoxylate bypass operon transcriptional repressor iclr | E9D03_RS16635 | Not Available | Positive | 3588083 - 3588907 | 29741.1 |
| shet2/espl2 family type iii secretion system effector toxin | E9D03_RS16640 | Not Available | Positive | 3589224 - 3591410 | 82577.9 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | E9D03_RS16645 | Not Available | Negative | 3591379 - 3593115 | 67738.4 |
| isocitrate lyase | E9D03_RS16650 | Not Available | Negative | 3593299 - 3594603 | 47511.0 |
| malate synthase a | E9D03_RS16655 | Not Available | Negative | 3594633 - 3596234 | 60278.9 |
| homoserine o-succinyltransferase | E9D03_RS16660 | Not Available | Negative | 3596503 - 3597432 | 35786.3 |
| acetyltransferase | E9D03_RS16665 | Not Available | Positive | 3597589 - 3598032 | 16521.8 |
| Trna-pro | Not Available | Not Available | Positive | 3598108 - 3598184 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




