Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannonate dehydratase | E9D03_RS16365 | Not Available | Negative | 3532343 - 3533527 | 44807.4 |
| gluconate permease gntp | E9D03_RS16370 | Not Available | Positive | 3533867 - 3535210 | 47141.0 |
| type 1 fimbria d-mannose specific adhesin fimh | E9D03_RS16375 | Not Available | Negative | 3535384 - 3536286 | 31461.2 |
| type 1 fimbria minor subunit fimg | E9D03_RS16380 | Not Available | Negative | 3536306 - 3536809 | 17385.4 |
| type 1 fimbria minor subunit fimf | E9D03_RS16385 | Not Available | Negative | 3536822 - 3537352 | 18716.3 |
| fimbrial biogenesis usher protein fimd | E9D03_RS16390 | Not Available | Negative | 3537362 - 3539900 | 92554.8 |
| duf1983 domain-containing protein | E9D03_RS16395 | Not Available | Negative | 3539901 - 3539989 | 3103.75 |
| 5'-deoxynucleotidase | E9D03_RS16405 | Not Available | Positive | 3540530 - 3541066 | 20325.5 |
| eae protein | E9D03_RS16410 | Not Available | Positive | 3541057 - 3541407 | 13210.7 |
| class i sam-dependent methyltransferase | E9D03_RS16415 | Not Available | Positive | 3541404 - 3541688 | 10782.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




