Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase | E9D03_RS16040 | Not Available | Positive | 3458667 - 3459713 | 38846.6 |
| dna damage-inducible protein i | E9D03_RS16045 | Not Available | Positive | 3459787 - 3460032 | 8949.43 |
| biofilm formation regulator bsss | E9D03_RS16050 | Not Available | Positive | 3460322 - 3460576 | 9633.29 |
| n-methyl-l-tryptophan oxidase | E9D03_RS16055 | Not Available | Positive | 3460691 - 3461809 | 40805.0 |
| duf2770 domain-containing protein | E9D03_RS16060 | Not Available | Positive | 3461857 - 3461970 | 4719.1 |
| cytochrome b | E9D03_RS16065 | Not Available | Positive | 3462231 - 3462797 | 20709.5 |
| ycei family protein | E9D03_RS16070 | Not Available | Positive | 3462801 - 3463376 | 20913.6 |
| rhodanese-related sulfurtransferase | E9D03_RS16075 | Not Available | Negative | 3463418 - 3464470 | 39712.4 |
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferasee | E9D03_RS16080 | Not Available | Positive | 3464695 - 3465615 | 35408.9 |
| acidic protein msyb | E9D03_RS16090 | Not Available | Positive | 3467096 - 3467470 | 14259.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




