Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body p-ring formation protein flga | E9D03_RS15990 | Not Available | Positive | 3450411 - 3451070 | 23398.4 |
| anti-sigma-28 factor flgm | E9D03_RS15995 | Not Available | Positive | 3451146 - 3451439 | 10355.2 |
| flagella biosynthesis chaperone flgn | E9D03_RS16000 | Not Available | Positive | 3451444 - 3451860 | 15867.9 |
| murein biosynthesis integral membrane protein murj | E9D03_RS16005 | Not Available | Negative | 3451900 - 3453435 | 55270.8 |
| gfo/idh/moca family oxidoreductase | E9D03_RS16010 | Not Available | Negative | 3453545 - 3454468 | 33720.5 |
| duf480 domain-containing protein | E9D03_RS16015 | Not Available | Negative | 3454470 - 3455117 | 24177.8 |
| ribosomal protein s5-alanine n-acetyltransferase | E9D03_RS16020 | Not Available | Negative | 3455128 - 3455712 | 22636.0 |
| multidrug efflux mfs transporter mdth | E9D03_RS16025 | Not Available | Positive | 3455948 - 3457156 | 44394.1 |
| glutaredoxin 2 | E9D03_RS16030 | Not Available | Positive | 3457220 - 3457867 | 24351.6 |
| lipoprotein | E9D03_RS16035 | Not Available | Positive | 3458001 - 3458561 | 20470.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




