Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-dihydroxy-2-naphthoyl-coa synthase | E9D03_RS00720 | Not Available | Negative | 163711 - 164568 | 31620.8 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | E9D03_RS00725 | Not Available | Negative | 164583 - 165341 | 27646.9 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | E9D03_RS00730 | Not Available | Negative | 165338 - 167008 | 61295.5 |
| isochorismate synthase menf | E9D03_RS00735 | Not Available | Negative | 167097 - 168392 | 48771.2 |
| stress response protein elab | E9D03_RS00740 | Not Available | Negative | 168471 - 168776 | 11306.3 |
| gnat family n-acetyltransferase | E9D03_RS00745 | Not Available | Negative | 168831 - 169292 | 17420.7 |
| ribonuclease bn | E9D03_RS00750 | Not Available | Positive | 169357 - 170274 | 33009.7 |
| deubiquitinase | E9D03_RS00755 | Not Available | Positive | 170465 - 171685 | 46519.0 |
| yfbm family protein | E9D03_RS00765 | Not Available | Positive | 172817 - 173320 | 18992.8 |
| nadh-quinone oxidoreductase subunit nuon | E9D03_RS00770 | Not Available | Negative | 173387 - 174844 | 52047.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




