Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dutp diphosphatase | E9D03_RS15575 | Not Available | Positive | 3362982 - 3363440 | 16288.7 |
| nucleoid occlusion factor slma | E9D03_RS15580 | Not Available | Positive | 3363547 - 3364143 | 22837.7 |
| orotate phosphoribosyltransferase | E9D03_RS15585 | Not Available | Negative | 3364180 - 3364821 | 23538.3 |
| ribonuclease ph | E9D03_RS15590 | Not Available | Negative | 3364887 - 3365603 | 25313.4 |
| yicc family protein | E9D03_RS15595 | Not Available | Positive | 3365730 - 3366593 | 33160.9 |
| dna damage-inducible protein d | E9D03_RS15600 | Not Available | Positive | 3366814 - 3367638 | 31066.6 |
| trimeric intracellular cation channel family protein | E9D03_RS15605 | Not Available | Positive | 3367930 - 3368547 | 22049.8 |
| nad-dependent dna ligase ligb | E9D03_RS15610 | Not Available | Negative | 3368544 - 3370226 | 63384.2 |
| guanylate kinase | E9D03_RS15615 | Not Available | Positive | 3370484 - 3371107 | 23652.1 |
| dna-directed rna polymerase subunit omega | E9D03_RS15620 | Not Available | Positive | 3371162 - 3371437 | 10237.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




