Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide core heptose(i) kinase rfap | E9D03_RS15525 | Not Available | Negative | 3354211 - 3355008 | 31034.0 |
| glycosyltransferase family 4 protein | E9D03_RS15530 | Not Available | Negative | 3355001 - 3356125 | 42511.6 |
| lipopolysaccharide core heptosyltransferase rfaq | E9D03_RS15535 | Not Available | Negative | 3356122 - 3357180 | 39448.9 |
| 3-deoxy-d-manno-octulosonic acid transferase | E9D03_RS15540 | Not Available | Positive | 3357593 - 3358870 | 47293.9 |
| pantetheine-phosphate adenylyltransferase | E9D03_RS15545 | Not Available | Positive | 3358878 - 3359357 | 17837.7 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | E9D03_RS15550 | Not Available | Negative | 3359396 - 3360205 | 30261.8 |
| 50s ribosomal protein l33 | E9D03_RS15555 | Not Available | Negative | 3360303 - 3360470 | 6371.94 |
| 50s ribosomal protein l28 | E9D03_RS15560 | Not Available | Negative | 3360491 - 3360727 | 9007.02 |
| jab domain-containing protein | E9D03_RS15565 | Not Available | Negative | 3360944 - 3361612 | 25259.9 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | E9D03_RS15570 | Not Available | Positive | 3361784 - 3363004 | 43440.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




