Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl co-a mutase-associated gtpase meab | E9D03_RS15170 | Not Available | Negative | 3280932 - 3281927 | 36687.1 |
| methylmalonyl-coa mutase | E9D03_RS15175 | Not Available | Negative | 3281920 - 3284064 | 77897.6 |
| lysr family transcriptional regulator argp | E9D03_RS15180 | Not Available | Negative | 3284268 - 3285161 | 33473.6 |
| ribose-5-phosphate isomerase rpia | E9D03_RS15185 | Not Available | Positive | 3285544 - 3286203 | 22861.8 |
| d-3-phosphoglycerate dehydrogenase | E9D03_RS15190 | Not Available | Positive | 3286458 - 3287690 | 44178.4 |
| type i toxin-antitoxin system toxin ibsc | E9D03_RS15195 | Not Available | Positive | 3287919 - 3287978 | 2179.02 |
| type i toxin-antitoxin system ibs family toxin | E9D03_RS15200 | Not Available | Positive | 3288312 - 3288371 | 2185.07 |
| 5-formyltetrahydrofolate cyclo-ligase | E9D03_RS15205 | Not Available | Negative | 3288472 - 3289074 | 23242.3 |
| cell division protein zapa | E9D03_RS15215 | Not Available | Negative | 3289320 - 3289649 | 12594.9 |
| upf0149 family protein ygfb | E9D03_RS15220 | Not Available | Positive | 3289817 - 3290395 | 21230.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




