Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | E9D03_RS00620 | Not Available | Positive | 143442 - 144632 | 44110.4 |
| isncy family transposase | E9D03_RS00625 | Not Available | Positive | 144825 - 145751 | 35745.8 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | E9D03_RS00630 | Not Available | Negative | 145792 - 146586 | 28655.3 |
| mfs transporter | E9D03_RS00635 | Not Available | Negative | 146612 - 147901 | 46130.3 |
| l-rhamnonate dehydratase | E9D03_RS00640 | Not Available | Negative | 147958 - 149163 | 44252.1 |
| iclr family transcriptional regulator | E9D03_RS00645 | Not Available | Negative | 149178 - 149960 | 28934.9 |
| nicotinamide mononucleotide deamidase-related protein yfay | E9D03_RS00650 | Not Available | Negative | 150180 - 151382 | 44194.2 |
| hypothetical protein | E9D03_RS00655 | Not Available | Negative | 151482 - 152024 | 18596.8 |
| nucleoside triphosphatase nudi | E9D03_RS00660 | Not Available | Positive | 152303 - 152728 | 16343.6 |
| histidine phosphatase family protein | E9D03_RS00665 | Not Available | Negative | 152767 - 153369 | 22277.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




