Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol:disulfide interchange protein dsba | E9D03_RS14870 | Not Available | Negative | 3225659 - 3226285 | 23105.8 |
| stress response kinase srka | E9D03_RS14875 | Not Available | Negative | 3226302 - 3227288 | 38127.4 |
| yihd family protein | E9D03_RS14880 | Not Available | Negative | 3227365 - 3227634 | 10273.5 |
| molybdenum cofactor guanylyltransferase moba | E9D03_RS14885 | Not Available | Positive | 3227704 - 3228288 | 21630.1 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | E9D03_RS14890 | Not Available | Positive | 3228270 - 3228797 | 19351.4 |
| integrase arm-type dna-binding domain-containing protein | E9D03_RS14895 | Not Available | Negative | 3228892 - 3230157 | 48007.1 |
| Trna-phe | Not Available | Not Available | Positive | 3230355 - 3230430 | Not Available |
| duf554 domain-containing protein | E9D03_RS14905 | Not Available | Negative | 3230536 - 3231243 | 24661.6 |
| ornithine decarboxylase | E9D03_RS14910 | Not Available | Positive | 3231641 - 3233776 | 79482.6 |
| nucleoside permease | E9D03_RS14915 | Not Available | Negative | 3233826 - 3235082 | 46392.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




