Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts transporter subunit eiia | E9D03_RS14665 | Not Available | Positive | 3177165 - 3178913 | 65989.6 |
| yiig family protein | E9D03_RS14670 | Not Available | Negative | 3178963 - 3180018 | 39335.4 |
| formate dehydrogenase accessory sulfurtransferase fdhd | E9D03_RS14675 | Not Available | Negative | 3180171 - 3181004 | 30533.8 |
| formate dehydrogenase-n subunit alpha | E9D03_RS14680 | Not Available | Positive | 3181198 - 3184248 | 112506.0 |
| formate dehydrogenase subunit beta | E9D03_RS14685 | Not Available | Positive | 3184261 - 3185163 | 33083.0 |
| formate dehydrogenase cytochrome b556 subunit | E9D03_RS14690 | Not Available | Positive | 3185160 - 3185795 | 24607.7 |
| formate dehydrogenase accessory protein fdhe | E9D03_RS14695 | Not Available | Positive | 3185792 - 3186721 | 34690.5 |
| hypothetical protein | E9D03_RS14700 | Not Available | Negative | 3187051 - 3187293 | 9325.03 |
| copg family transcriptional regulator | E9D03_RS14705 | Not Available | Negative | 3187510 - 3187728 | 8408.23 |
| transposase | E9D03_RS14710 | Not Available | Negative | 3188422 - 3189336 | 33692.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




