Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | E9D03_RS14255 | Not Available | Negative | 3084528 - 3084968 | 17173.9 |
| dna-3-methyladenine glycosylase i | E9D03_RS14260 | Not Available | Negative | 3084965 - 3085528 | 21152.3 |
| autotransporter outer membrane beta-barrel domain-containing protein | E9D03_RS14265 | Not Available | Positive | 3085686 - 3086384 | 25962.0 |
| mfs transporter | E9D03_RS14270 | Not Available | Positive | 3086613 - 3087815 | 42790.2 |
| long polar fimbria major subunit lpfa1 | E9D03_RS14275 | Not Available | Positive | 3088159 - 3088683 | 17970.1 |
| molecular chaperone lpfb | E9D03_RS14280 | Not Available | Positive | 3088748 - 3089434 | 25068.2 |
| minor fimbrial subunit lpfd | E9D03_RS14290 | Not Available | Positive | 3092051 - 3093106 | 37241.3 |
| long polar fimbrial protein lpfe | E9D03_RS14295 | Not Available | Positive | 3093111 - 3093641 | 18475.7 |
| kdo(2)-lipid a phosphoethanolamine 7''-transferase | E9D03_RS14300 | Not Available | Positive | 3093896 - 3095587 | 63807.0 |
| Trna-pro | Not Available | Not Available | Positive | 3095679 - 3095755 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




