Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | E9D03_RS14105 | Not Available | Positive | 3050762 - 3051898 | 41772.6 |
| lysr family transcriptional regulator | E9D03_RS14110 | Not Available | Negative | 3051895 - 3052869 | 37301.5 |
| mipa/ompv family protein | E9D03_RS14115 | Not Available | Positive | 3052993 - 3053733 | 27370.9 |
| glycoside hydrolase family 127 protein | E9D03_RS14120 | Not Available | Negative | 3053863 - 3055833 | 75057.9 |
| mfs transporter | E9D03_RS14125 | Not Available | Negative | 3055844 - 3057244 | 51389.9 |
| arac family transcriptional regulator | E9D03_RS14130 | Not Available | Positive | 3057470 - 3058285 | 31525.1 |
| transcriptional regulator | E9D03_RS14135 | Not Available | Positive | 3058278 - 3058427 | 5273.33 |
| 4fe-4s dicluster domain-containing protein | E9D03_RS14140 | Not Available | Positive | 3058529 - 3059002 | 17435.1 |
| valine--pyruvate transaminase | E9D03_RS14145 | Not Available | Negative | 3059154 - 3060407 | 46689.9 |
| alpha-amylase | E9D03_RS14150 | Not Available | Negative | 3060585 - 3062615 | 75679.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




