Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 1 small subunit | E9D03_RS14050 | Not Available | Negative | 3038811 - 3039929 | 40673.5 |
| Trna-ser | Not Available | Not Available | Positive | 3040355 - 3040442 | Not Available |
| glutathione s-transferase | E9D03_RS14065 | Not Available | Positive | 3041539 - 3042147 | 22576.4 |
| l-seryl-trna(sec) selenium transferase | E9D03_RS14070 | Not Available | Positive | 3042245 - 3043636 | 50610.2 |
| selenocysteine-specific translation elongation factor | E9D03_RS14075 | Not Available | Positive | 3043633 - 3045477 | 68808.5 |
| l-threonine dehydrogenase | E9D03_RS14080 | Not Available | Positive | 3045666 - 3046817 | 40312.6 |
| fic family protein | E9D03_RS14085 | Not Available | Positive | 3046947 - 3048242 | 48528.1 |
| aldehyde dehydrogenase | E9D03_RS14090 | Not Available | Positive | 3048350 - 3049888 | 56352.5 |
| hypothetical protein | E9D03_RS14095 | Not Available | Negative | 3050107 - 3050250 | 5394.99 |
| duf3302 domain-containing protein | E9D03_RS14100 | Not Available | Positive | 3050433 - 3050756 | 12409.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




