Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-protein kinase | E9D03_RS14000 | Not Available | Positive | 3027847 - 3030027 | 81264.5 |
| appa family phytase/histidine-type acid phosphatase | E9D03_RS14005 | Not Available | Negative | 3030147 - 3031451 | 47339.8 |
| cytochrome bd-ii oxidase subunit cbdx | E9D03_RS14010 | Not Available | Negative | 3031531 - 3031623 | 3597.68 |
| cytochrome d ubiquinol oxidase subunit ii | E9D03_RS14015 | Not Available | Negative | 3031636 - 3032772 | 42443.3 |
| cytochrome bd-ii oxidase subunit 1 | E9D03_RS14020 | Not Available | Negative | 3032784 - 3034328 | 58024.3 |
| hydrogenase expression/formation protein | E9D03_RS14025 | Not Available | Negative | 3034462 - 3035319 | 31530.7 |
| hydrogenase-1 operon protein hyae | E9D03_RS14030 | Not Available | Negative | 3035316 - 3035714 | 14897.6 |
| hydrogenase 1 maturation protease | E9D03_RS14035 | Not Available | Negative | 3035711 - 3036298 | 21456.6 |
| ni/fe-hydrogenase b-type cytochrome subunit | E9D03_RS14040 | Not Available | Negative | 3036295 - 3037002 | 27598.8 |
| ni/fe-hydrogenase large subunit | E9D03_RS14045 | Not Available | Negative | 3037021 - 3038814 | 66286.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




