Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ymce | E9D03_RS13950 | Not Available | Negative | 3020757 - 3020987 | 8683.6 |
| cold-shock protein | E9D03_RS13955 | Not Available | Negative | 3020962 - 3021150 | 7104.55 |
| cold shock protein cspg | E9D03_RS13960 | Not Available | Negative | 3021161 - 3021373 | 7781.14 |
| cold shock-like protein csph | E9D03_RS13965 | Not Available | Positive | 3021659 - 3021871 | 7720.48 |
| threonine-rich inner membrane protein gfca | E9D03_RS13970 | Not Available | Positive | 3022313 - 3022618 | 9447.98 |
| yjbf family lipoprotein | E9D03_RS13975 | Not Available | Positive | 3022725 - 3023369 | 24249.9 |
| capsule biosynthesis gfcc family protein | E9D03_RS13980 | Not Available | Positive | 3023366 - 3024112 | 27278.6 |
| yjbh domain-containing protein | E9D03_RS13985 | Not Available | Positive | 3024112 - 3026208 | 78675.2 |
| polysaccharide export protein | E9D03_RS13990 | Not Available | Positive | 3026254 - 3027393 | 41743.2 |
| protein-tyrosine-phosphatase etp | E9D03_RS13995 | Not Available | Positive | 3027381 - 3027827 | 16386.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




