Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbria chaperone fimc | E9D03_RS13585 | Not Available | Positive | 2931116 - 2931841 | 26644.5 |
| dead/deah box helicase family protein | E9D03_RS13595 | Not Available | Negative | 2932725 - 2935085 | 88029.5 |
| inovirus gp2 family protein | E9D03_RS13600 | Not Available | Negative | 2935240 - 2935803 | 22435.9 |
| duf3987 domain-containing protein | E9D03_RS13605 | Not Available | Negative | 2936624 - 2938009 | 52347.1 |
| duf3987 domain-containing protein | E9D03_RS13610 | Not Available | Negative | 2938228 - 2938425 | 7083.89 |
| alpa family transcriptional regulator | E9D03_RS13615 | Not Available | Negative | 2938652 - 2938948 | 11020.2 |
| hypothetical protein | E9D03_RS13625 | Not Available | Positive | 2940060 - 2941877 | 70815.2 |
| tyrosine-type recombinase/integrase | E9D03_RS13630 | Not Available | Negative | 2942064 - 2943266 | 45418.8 |
| hypothetical protein | E9D03_RS13635 | Not Available | Negative | 2943633 - 2944619 | 38726.7 |
| acp s-malonyltransferase | E9D03_RS13640 | Not Available | Negative | 2944616 - 2945557 | 34265.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




