Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent dna methyltransferase | E9D03_RS13530 | Not Available | Positive | 2908563 - 2913497 | 189021.0 |
| dead/deah box helicase | E9D03_RS13535 | Not Available | Positive | 2913497 - 2919838 | 238245.0 |
| atp-dependent helicase | E9D03_RS13540 | Not Available | Positive | 2919835 - 2921949 | 79383.9 |
| sialate o-acetylesterase | E9D03_RS13550 | Not Available | Negative | 2923443 - 2924423 | 36881.9 |
| n-acetylneuraminate epimerase | E9D03_RS13555 | Not Available | Negative | 2924488 - 2925594 | 39552.2 |
| n-acetylneuraminic acid outer membrane channel nanc | E9D03_RS13560 | Not Available | Negative | 2925614 - 2926330 | 27889.4 |
| type 1 fimbria regulatory protein fimb | E9D03_RS13565 | Not Available | Positive | 2927786 - 2928388 | 22994.8 |
| type 1 fimbria regulatory protein fime | E9D03_RS13570 | Not Available | Positive | 2928866 - 2929462 | 23102.7 |
| metal abc transporter substrate-binding lipoprotein/fibrin-binding adhesin fima | E9D03_RS13575 | Not Available | Positive | 2929927 - 2930475 | 18225.3 |
| type 1 fimbrial protein | E9D03_RS13580 | Not Available | Positive | 2930540 - 2931079 | 19315.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




