Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase msra | E9D03_RS13220 | Not Available | Negative | 2830289 - 2830927 | 23356.3 |
| autotransporter assembly complex protein tama | E9D03_RS13225 | Not Available | Positive | 2831133 - 2832866 | 64799.7 |
| autotransporter assembly complex protein tamb | E9D03_RS13230 | Not Available | Positive | 2832863 - 2836642 | 136890.0 |
| gamma-glutamylcyclotransferase | E9D03_RS13235 | Not Available | Positive | 2836645 - 2836986 | 12867.2 |
| type ii toxin-antitoxin system chps family antitoxin | E9D03_RS13240 | Not Available | Positive | 2837198 - 2837449 | 9300.18 |
| endoribonuclease toxin chpb | E9D03_RS13245 | Not Available | Positive | 2837443 - 2837793 | 12512.2 |
| inorganic diphosphatase | E9D03_RS13250 | Not Available | Negative | 2837873 - 2838403 | 19704.6 |
| galactofuranose abc transporter substrate-binding protein ytfq | E9D03_RS13255 | Not Available | Positive | 2838713 - 2839669 | 34332.5 |
| sugar abc transporter atp-binding protein | E9D03_RS13260 | Not Available | Positive | 2839809 - 2841311 | 55291.5 |
| abc transporter permease | E9D03_RS13265 | Not Available | Positive | 2841325 - 2842347 | 35528.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




