Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxyl carrier protein | E9D03_RS13060 | Not Available | Positive | 2797829 - 2798299 | 16688.2 |
| acetyl-coa carboxylase biotin carboxylase subunit | E9D03_RS13065 | Not Available | Positive | 2798310 - 2799659 | 49339.7 |
| yhdt family protein | E9D03_RS13070 | Not Available | Positive | 2799768 - 2800010 | 9142.29 |
| sodium/pantothenate symporter | E9D03_RS13075 | Not Available | Positive | 2800000 - 2801451 | 51720.3 |
| 50s ribosomal protein l11 methyltransferase | E9D03_RS13080 | Not Available | Positive | 2801463 - 2802344 | 31878.8 |
| trna dihydrouridine synthase dusb | E9D03_RS13085 | Not Available | Positive | 2802673 - 2803638 | 35868.2 |
| dna-binding transcriptional regulator fis | E9D03_RS13090 | Not Available | Positive | 2803664 - 2803960 | 11240.6 |
| adenine-specific dna-methyltransferase | E9D03_RS13095 | Not Available | Positive | 2804045 - 2804929 | 33395.3 |
| duf2556 domain-containing protein | E9D03_RS13100 | Not Available | Positive | 2805013 - 2805192 | 7203.93 |
| multidrug efflux transporter transcriptional repressor acrs | E9D03_RS13105 | Not Available | Negative | 2805195 - 2805857 | 25199.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




