Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose-5-phosphate isomerase kdsd | E9D03_RS12810 | Not Available | Positive | 2741052 - 2742038 | 35212.3 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | E9D03_RS12815 | Not Available | Positive | 2742059 - 2742625 | 19998.3 |
| lps export abc transporter periplasmic protein lptc | E9D03_RS12820 | Not Available | Positive | 2742622 - 2743197 | 21703.8 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | E9D03_RS12825 | Not Available | Positive | 2743166 - 2743723 | 20128.1 |
| lps export abc transporter atp-binding protein | E9D03_RS12830 | Not Available | Positive | 2743730 - 2744455 | 26802.3 |
| rna polymerase factor sigma-54 | E9D03_RS12835 | Not Available | Positive | 2744503 - 2745936 | 53996.8 |
| ribosome hibernation promoting factor | E9D03_RS12840 | Not Available | Positive | 2745959 - 2746246 | 10750.9 |
| pts iia-like nitrogen regulatory protein ptsn | E9D03_RS12845 | Not Available | Positive | 2746364 - 2746855 | 17959.7 |
| rnase adapter rapz | E9D03_RS12850 | Not Available | Positive | 2746901 - 2747755 | 32494.2 |
| pts phosphocarrier protein npr | E9D03_RS12855 | Not Available | Positive | 2747752 - 2748024 | 9810.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




