Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosome-binding factor rbfa | E9D03_RS12660 | Not Available | Negative | 2712707 - 2713108 | 15155.4 |
| translation initiation factor if-2 | E9D03_RS12665 | Not Available | Negative | 2713273 - 2715945 | 97355.5 |
| transcription termination/antitermination protein nusa | E9D03_RS12670 | Not Available | Negative | 2715970 - 2717457 | 54874.0 |
| ribosome maturation factor rimp | E9D03_RS12675 | Not Available | Negative | 2717485 - 2717937 | 16651.9 |
| Trna-met | Not Available | Not Available | Positive | 2718144 - 2718220 | Not Available |
| argininosuccinate synthase | E9D03_RS12685 | Not Available | Positive | 2718568 - 2719911 | 49933.4 |
| phosphoethanolamine transferase | E9D03_RS12690 | Not Available | Negative | 2719919 - 2721544 | 60642.7 |
| Trna-leu | Not Available | Not Available | Positive | 2722003 - 2722089 | Not Available |
| preprotein translocase subunit secg | E9D03_RS12700 | Not Available | Negative | 2722104 - 2722436 | 11365.8 |
| phosphoglucosamine mutase | E9D03_RS12705 | Not Available | Negative | 2722664 - 2724001 | 47549.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




