Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| u32 family peptidase | E9D03_RS12610 | Not Available | Positive | 2701416 - 2702411 | 37035.2 |
| u32 family peptidase | E9D03_RS12615 | Not Available | Positive | 2702420 - 2703298 | 32523.1 |
| llm class flavin-dependent oxidoreductase | E9D03_RS12620 | Not Available | Positive | 2703379 - 2704386 | 37073.4 |
| tryptophan permease | E9D03_RS12625 | Not Available | Negative | 2704503 - 2705747 | 44423.2 |
| dead/deah family atp-dependent rna helicase | E9D03_RS12630 | Not Available | Negative | 2705901 - 2707790 | 70580.6 |
| protein yrbn | E9D03_RS12635 | Not Available | Negative | 2707783 - 2707863 | 2979.59 |
| lipoprotein nlpi | E9D03_RS12640 | Not Available | Negative | 2707970 - 2708854 | 33652.6 |
| polyribonucleotide nucleotidyltransferase | E9D03_RS12645 | Not Available | Negative | 2708963 - 2711098 | 77106.6 |
| 30s ribosomal protein s15 | E9D03_RS12650 | Not Available | Negative | 2711345 - 2711614 | 10297.5 |
| trna pseudouridine(55) synthase trub | E9D03_RS12655 | Not Available | Negative | 2711763 - 2712707 | 35089.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




