Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee muramidase etga | E9D03_RS12510 | Not Available | Negative | 2687132 - 2687590 | 17078.5 |
| type iii secretion system lee grla-binding negative regulator grlr | E9D03_RS12515 | Not Available | Positive | 2687786 - 2688157 | 13929.9 |
| type iii secretion system lee transcriptional regulator grla | E9D03_RS12520 | Not Available | Positive | 2688212 - 2688625 | 16085.4 |
| type iii secretion system lee chaperone cesd | E9D03_RS12525 | Not Available | Negative | 2689009 - 2689464 | 17503.7 |
| type iii secretion system lee outer membrane ring protein escc | E9D03_RS12530 | Not Available | Negative | 2689478 - 2691016 | 56201.9 |
| type iii secretion system lee switch protein sepd | E9D03_RS12535 | Not Available | Negative | 2691016 - 2691471 | 17562.0 |
| escj protein | E9D03_RS12540 | Not Available | Negative | 2691477 - 2691944 | 16811.1 |
| fimbrial protein | E9D03_RS12545 | Not Available | Positive | 2691951 - 2692363 | 14671.4 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | E9D03_RS12550 | Not Available | Negative | 2692406 - 2693266 | 31349.7 |
| penicillin-binding protein activator | E9D03_RS12555 | Not Available | Positive | 2693331 - 2695367 | 72815.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




