Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee effector espg | E9D03_RS12460 | Not Available | Negative | 2679776 - 2680921 | 42035.7 |
| type iii secretion system lee master regulator ler | E9D03_RS12465 | Not Available | Positive | 2682235 - 2682606 | 14331.0 |
| type iii secretion system lee co-chaperone esce | E9D03_RS12470 | Not Available | Positive | 2682621 - 2682839 | 8450.38 |
| type iii secretion system lee chaperone cesab | E9D03_RS12475 | Not Available | Positive | 2682852 - 2683166 | 11999.4 |
| hypothetical protein | E9D03_RS12480 | Not Available | Positive | 2683163 - 2683762 | 23475.4 |
| type iii secretion system lee stator protein espl | E9D03_RS12485 | Not Available | Positive | 2683749 - 2684402 | 25459.2 |
| type iii secretion system lee export apparatus protein escr | E9D03_RS12490 | Not Available | Positive | 2684407 - 2685060 | 24384.0 |
| type iii secretion system lee export apparatus protein escs | E9D03_RS12495 | Not Available | Positive | 2685060 - 2685329 | 9921.56 |
| type iii secretion system lee export apparatus protein esct | E9D03_RS12500 | Not Available | Positive | 2685329 - 2686105 | 28718.9 |
| type iii secretion system lee export apparatus switch protein escu | E9D03_RS12505 | Not Available | Positive | 2686098 - 2687135 | 39193.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




