Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phospho-alpha-glucosidase | E9D03_RS12300 | Not Available | Positive | 2649421 - 2650743 | 49388.0 |
| arac family transcriptional regulator | E9D03_RS12305 | Not Available | Negative | 2650740 - 2651633 | 33987.9 |
| solute:sodium symporter family transporter | E9D03_RS12310 | Not Available | Positive | 2651800 - 2653515 | 62118.8 |
| sulfatase-like hydrolase/transferase | E9D03_RS12315 | Not Available | Positive | 2653512 - 2655005 | 57260.3 |
| hypothetical protein | E9D03_RS12320 | Not Available | Negative | 2655052 - 2655501 | 15767.9 |
| yidh family protein | E9D03_RS12325 | Not Available | Positive | 2655610 - 2655957 | 12780.1 |
| duf202 domain-containing protein | E9D03_RS12330 | Not Available | Positive | 2655947 - 2656309 | 13769.1 |
| radical sam protein | E9D03_RS12335 | Not Available | Positive | 2656306 - 2656803 | 19133.9 |
| multidrug efflux mfs transporter emrd | E9D03_RS12340 | Not Available | Negative | 2656811 - 2657995 | 42241.5 |
| type i toxin-antitoxin system toxin tisb | E9D03_RS12345 | Not Available | Negative | 2658275 - 2658364 | 3195.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




