Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertase yidc | E9D03_RS12200 | Not Available | Negative | 2629437 - 2631083 | 61543.5 |
| membrane protein insertion efficiency factor yidd | E9D03_RS12205 | Not Available | Negative | 2631086 - 2631343 | 9380.63 |
| ribonuclease p protein component | E9D03_RS12210 | Not Available | Negative | 2631307 - 2631666 | 13789.1 |
| 50s ribosomal protein l34 | E9D03_RS12215 | Not Available | Negative | 2631683 - 2631823 | 5380.74 |
| hypothetical protein | E9D03_RS12220 | Not Available | Negative | 2632053 - 2632133 | 3111.7 |
| chromosomal replication initiator protein dnaa | E9D03_RS12225 | Not Available | Positive | 2632430 - 2633833 | 52543.7 |
| dna polymerase iii subunit beta | E9D03_RS12230 | Not Available | Positive | 2633838 - 2634938 | 40589.1 |
| dna replication/repair protein recf | E9D03_RS12235 | Not Available | Positive | 2634938 - 2636011 | 40516.4 |
| dna topoisomerase (atp-hydrolyzing) subunit b | E9D03_RS12240 | Not Available | Positive | 2636040 - 2638454 | 89955.0 |
| yidb family protein | E9D03_RS12245 | Not Available | Positive | 2638685 - 2639092 | 14171.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




