Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | E9D03_RS12095 | Not Available | Positive | 2602865 - 2603947 | 38137.8 |
| phosphate abc transporter substrate-binding protein psts | E9D03_RS12100 | Not Available | Positive | 2604159 - 2605199 | 37051.9 |
| phosphate abc transporter permease pstc | E9D03_RS12105 | Not Available | Positive | 2605286 - 2606245 | 34123.1 |
| phosphate abc transporter permease psta | E9D03_RS12110 | Not Available | Positive | 2606245 - 2607135 | 32275.7 |
| phosphate abc transporter atp-binding protein pstb | E9D03_RS12115 | Not Available | Positive | 2607318 - 2608091 | 29028.9 |
| phosphate signaling complex protein phou | E9D03_RS12120 | Not Available | Positive | 2608106 - 2608831 | 27443.2 |
| hypothetical protein | E9D03_RS12125 | Not Available | Positive | 2609256 - 2609390 | 5036.14 |
| type iii effector protein | E9D03_RS12130 | Not Available | Positive | 2609357 - 2611741 | 93146.5 |
| hypothetical protein | E9D03_RS12135 | Not Available | Negative | 2612726 - 2613397 | 26242.1 |
| t3ss effector espy4 | E9D03_RS12140 | Not Available | Positive | 2613698 - 2616106 | 93165.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




